Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015829074.1_cds_XP_016503592.1_17123
CDS Infomation

[gene=LOC107821675] [db_xref=GeneID:107821675] [protein=rop guanine nucleotide exchange factor 12-like] [protein_id=XP_016503592.1] [location=complement(join(65967..66320,66536..66856,67471..67740,67836..67910,67997..68151,68626..68742,69234..69366))] [gbkey=CDS]
Sequence

ATGATTCTTGAGACGAAAAACAATTCAATGGCTGGGTGCAGGGCGCTTAAACGTAATGAG
ACTTTCAAGTCTCGTATGGCTAATGATTCAGGTGTCGAGTCTAGCCCTCGTGCCCAACAG
AACCAGCCTTCAGATATGGAGCTAATGAAGGAAAAGTTTGCAAAGTTGCTCCTTGGCGAG
GATATGTCTGGTGGAGGAAAGGGTGTCTCTTCTGCGCTGGCTTTGTCAAATTCAATCACA
AACCTAGCAGCTTCCGTTTTTGGAGAACTGAAGAGATTAGAGCCAATGCCCGCCGAGACA
AAAGCCAAATGGAGAAAAGAAATTGGTTGGCTTTTATCAGTCACAGATCACATTGTTGAA
TTTGTTCCTTGTAATCAAAAATCAAAAGATGGAACAAACATGGAGGTTATGGTAACAAAG
CAGCGATCCGATCTTCAAATGAACATACCAGCACTACGCAAGCTAGATGCAATGCTTATT
GATTGCTTAGATAGCTTTAAGGATCAAAATGAGTTCTCCTATGTATCAAAAGATGATCAA
TCAGAGGATGGAAAAAACAGCAGGAATGATGACAAATGGTGGATACCGACTCCTAAGGTT
CCTCCTAACGGCTTATCTGATCCTATGAGGAAATGGCTGCAATTTCAGAAGGATTCAGTA
AATCAAGTTCATAAAGCAGCCATGGCTATAAATGCACAAGTCCTGTCAGAAATGGAGATC
CCAGAAAGTTATATAGAATCCCTACCTAAGAAAGGGAGAGCAAGCCTAGGAGATTCAATA
TACAAAAGCATCACTGACGAGTACTTTGATCCGGATTACTTCTTCACAACTATGGACTTG
TCTTCGGAGCATAAAATTGTAGATCTCAAGAACAGGATTGAGGCTTCTGTAGTTATTTGG
AGAAGAAAGATGAATGCTAAAGATGGGAAATCAGCCTGGGGTTCAGCTGTTAGCTTTGAG
AAGAGAGAAATATTCGAAGAAAGAGCTGAGCTTGTCCTGCTGATTCTTAAGCAGCGTTTC
CCTGGAATTCCTCAGTCAACATTAGACATTAGTAAAATCCAATACAACAGAGATCTGGGG
CAAGCTGTTTTAGAAAGTTATTCAAGAATAATAGAAAGCAGGGCATTCACCATCATGTCG
CGAATTGAAGACGTTCTACAATCAGATGCTACGGTCCAAAATCCTTCCAATGGAGAAGTA
AAGAGATCACTACCAGATACAGAAGAAGTAGGGAAAACACTATTGGACTTCATTGGTTGG
ACAGTGGACCAAGAAGATAACAACACAAAGAAAGATTTGAAGGAGGACTCAACTAAAGAT
GTTGATCCGAAGTTTCTATGCAAACCTCCTAACATAGTCACCAACAAGAGATTTTCTTAC
CTAGAGAACTTAGGTATGTGTAGAAGTCCAACAGCCCGCCACTAA

Peptide Sequence

PEP ID

XP_016503592.1
PEP Infomation

PREDICTED: rop guanine nucleotide exchange factor 12-like [Nicotiana tabacum]
Sequence

MILETKNNSMAGCRALKRNETFKSRMANDSGVESSPRAQQNQPSDMELMKEKFAKLLLGE
DMSGGGKGVSSALALSNSITNLAASVFGELKRLEPMPAETKAKWRKEIGWLLSVTDHIVE
FVPCNQKSKDGTNMEVMVTKQRSDLQMNIPALRKLDAMLIDCLDSFKDQNEFSYVSKDDQ
SEDGKNSRNDDKWWIPTPKVPPNGLSDPMRKWLQFQKDSVNQVHKAAMAINAQVLSEMEI
PESYIESLPKKGRASLGDSIYKSITDEYFDPDYFFTTMDLSSEHKIVDLKNRIEASVVIW
RRKMNAKDGKSAWGSAVSFEKREIFEERAELVLLILKQRFPGIPQSTLDISKIQYNRDLG
QAVLESYSRIIESRAFTIMSRIEDVLQSDATVQNPSNGEVKRSLPDTEEVGKTLLDFIGW
TVDQEDNNTKKDLKEDSTKDVDPKFLCKPPNIVTNKRFSYLENLGMCRSPTARH

Transcript Sequence

Gene sequence data has not been registered.